Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NMB1986Hypothetical protein; Identified by Glimmer2; putative. (143 aa)    
Predicted Functional Partners:
NMB1040
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.752
NMB1580
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.741
NMB0341
tspA protein; Identified by similarity to GP:3413497; match to protein family HMM PF01476.
  
     0.730
NMB1551
Conserved hypothetical protein; Identified by similarity to GP:3402502; match to protein family HMM PF05707.
  
    0.722
NMB1626
Conserved hypothetical protein; Identified by similarity to GP:3402502; match to protein family HMM PF05707.
  
     0.720
tbp1
Transferrin-binding protein 1; Acts as a transferrin receptor and is required for transferrin utilization; Belongs to the TonB-dependent receptor family.
  
     0.718
NMB1645
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.710
lbpA
Lactoferrin-binding protein A; Unknown. May be an iron-siderophore receptor.
  
     0.707
NMB1634
Conserved hypothetical protein; Identified by similarity to GP:3402495; match to protein family HMM PF02486.
  
     0.670
NMB1818
Putative lipopolysaccharide biosynthesis protein; Identified by similarity to EGAD:165571; match to protein family HMM PF01943.
  
     0.658
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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