STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB2001Conserved hypothetical protein; Identified by similarity to EGAD:91561; match to protein family HMM PF00877. (251 aa)    
Predicted Functional Partners:
NMB2002
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.767
NMB0008
Putative cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.714
rmuC
Conserved hypothetical protein; Involved in DNA recombination.
   
  
 0.514
NMB0194
Putative amino acid symporter; Identified by similarity to EGAD:28821; match to protein family HMM PF01235; match to protein family HMM TIGR00835.
   
    0.513
NMB1333
Conserved hypothetical protein; Identified by similarity to EGAD:27923; match to protein family HMM PF01551.
      
 0.510
NMB1523
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.510
pemI
pemI protein; Identified by similarity to EGAD:24580; match to protein family HMM PF04014.
      
 0.487
potD-2
Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
   
    0.484
hslO
Conserved hypothetical protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.
       0.458
NMB2003
Conserved hypothetical protein; Identified by similarity to EGAD:9831; match to protein family HMM PF03788.
       0.450
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.