STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB2003Conserved hypothetical protein; Identified by similarity to EGAD:9831; match to protein family HMM PF03788. (115 aa)    
Predicted Functional Partners:
NMB2004
Conserved hypothetical protein; Identified by similarity to EGAD:8297; match to protein family HMM PF04172.
 
  
 0.992
carB
Carbamoyl-phosphate synthase, large subunit; Identified by similarity to EGAD:19159; match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM TIGR01369.
   
  
 0.771
NMB1267
Low molecular weight protein tyrosine-phosphatase; Identified by similarity to EGAD:107998; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.737
argJ
Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
  
    0.600
etfB
Electron transfer flavoprotein, beta subunit; Identified by similarity to EGAD:40692; match to protein family HMM PF01012.
      
 0.580
NMB2002
Hypothetical protein; Identified by Glimmer2; putative.
       0.480
pglB
Pilin glycosylation protein PglB; Identified by similarity to GB:3299889; match to protein family HMM PF00132; match to protein family HMM PF02397.
   
  
 0.465
NMB2006
Chloride channel protein-related protein; Identified by similarity to EGAD:47927; match to protein family HMM PF00654.
  
    0.459
NMB2001
Conserved hypothetical protein; Identified by similarity to EGAD:91561; match to protein family HMM PF00877.
  
    0.457
NMB1870
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.414
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.