NMB2011 protein (Neisseria meningitidis) - STRING interaction network

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Score

NMB2011

ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310. (1139 aa)

Predicted Functional Partners:

NMB2007

0.977

rpsE

0.787

rpsD

0.782

rpsK

0.767

NMB0930

0.731

rpsO

0.686

rpsQ

0.673

fusA

0.672

rpsL

0.669

rpsG

0.667

Your Current Organism:

Neisseria meningitidis

NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NMB0930	NMB2011	NMB0930	NMB2011	Identified by similarity to EGAD:36665; match to protein family HMM PF00860; match to protein family HMM TIGR00801.	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310.	0.731
NMB2007	NMB2011	NMB2007	NMB2011	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742299.	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310.	0.977
NMB2007	fusA	NMB2007	NMB0138	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742299.	Elongation factor G (EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.672
NMB2007	rpsD	NMB2007	NMB0167	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742299.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.782
NMB2007	rpsE	NMB2007	NMB0159	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742299.	30s ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.787
NMB2007	rpsG	NMB2007	NMB0137	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742299.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.667
NMB2007	rpsK	NMB2007	NMB0166	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742299.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.767
NMB2007	rpsL	NMB2007	NMB0136	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742299.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.669
NMB2007	rpsO	NMB2007	NMB0609	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742299.	30s ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.686
NMB2007	rpsQ	NMB2007	NMB0151	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742299.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.673
NMB2011	NMB0930	NMB2011	NMB0930	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310.	Identified by similarity to EGAD:36665; match to protein family HMM PF00860; match to protein family HMM TIGR00801.	0.731
NMB2011	NMB2007	NMB2011	NMB2007	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310.	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742299.	0.977
NMB2011	fusA	NMB2011	NMB0138	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310.	Elongation factor G (EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.672
NMB2011	rpsD	NMB2011	NMB0167	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.782
NMB2011	rpsE	NMB2011	NMB0159	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310.	30s ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.787
NMB2011	rpsG	NMB2011	NMB0137	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.667
NMB2011	rpsK	NMB2011	NMB0166	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.767
NMB2011	rpsL	NMB2011	NMB0136	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.669
NMB2011	rpsO	NMB2011	NMB0609	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310.	30s ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.686
NMB2011	rpsQ	NMB2011	NMB0151	ATP-dependent RNA helicase HrpA, truncation; Identified by similarity to GP:1742310.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.673