STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB2014Hypothetical protein; Identified by Glimmer2; putative. (82 aa)    
Predicted Functional Partners:
NMB1914
Hypothetical protein; Identified by Glimmer2; putative.
   
  
 0.670
NMB1224
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.668
NMB2110
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.668
NMB1826
Conserved hypothetical protein; Identified by similarity to EGAD:13382; match to protein family HMM PF01479.
      
 0.615
NMB0792
Transporter, NadC family; Identified by similarity to EGAD:29242; match to protein family HMM PF00939; match to protein family HMM TIGR00785.
      
 0.587
NMB2013
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.562
NMB0810
Transcriptional regulator, TetR family; Identified by similarity to EGAD:17310; match to protein family HMM PF00440.
      
 0.539
NMB2012
Transcriptional regulator, HTH_3 family; Identified by similarity to EGAD:161488; match to protein family HMM PF06114; match to protein family HMM TIGR01199.
  
    0.538
nadC
Nicotinate-nucleotide pyrophosphorylase; Identified by similarity to EGAD:42463; match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078; Belongs to the NadC/ModD family.
      
 0.528
fur
Ferric uptake regulation protein; Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of the fbp protein.
      
 0.526
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.