STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB2020Conserved hypothetical protein; Identified by similarity to EGAD:6204; match to protein family HMM PF01027. (227 aa)    
Predicted Functional Partners:
NMB0778
Putative uroporphyrin-III C-methyltransferase HemX; Identified by similarity to EGAD:22018; match to protein family HMM PF04375.
  
     0.630
pilB
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity).
  
   0.609
NMB2021
Conserved hypothetical protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.
 
     0.546
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein; Identified by similarity to GP:3273344.
  
     0.538
kdtB
Lipopolysaccharide core biosynthesis protein KdtB; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
  
    0.538
NMB0779
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.506
NMB0691
Putative colicin V production protein; Identified by similarity to EGAD:28218; match to protein family HMM PF02674.
  
    0.497
NMB2091
Putative hemolysin; Identified by similarity to EGAD:28637; match to protein family HMM PF04972.
  
    0.488
sdhC
Succinate dehydrogenase, cytochrome b556 subunit; Identified by similarity to GP:3273343; match to protein family HMM PF01127.
  
    0.474
NMB1461
Drug resistance translocase family protein; Identified by similarity to EGAD:91169; match to protein family HMM PF07690.
  
     0.464
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.