Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NMB2135Conserved hypothetical protein; Identified by similarity to EGAD:29466; match to protein family HMM PF04357. (1405 aa)    
Predicted Functional Partners:
NMB2134
Conserved hypothetical protein; Identified by similarity to EGAD:24660; match to protein family HMM PF01103.
 
 
 0.995
NMB1440
Hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.769
NMB1269
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.768
NMB0596
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.765
NMB1349
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.750
NMB0476
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.747
NMB0667
Hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.743
NMB0889
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.739
NMB0454
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.737
NMB1345
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.734
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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