Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NMB2146Hypothetical protein; Identified by Glimmer2; putative. (36 aa)    
Predicted Functional Partners:
NMB2147
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.692
NMB2143
Conserved hypothetical protein; Identified by similarity to EGAD:28581.
  
    0.530
NMB2144
Putative sigma factor; Identified by similarity to EGAD:28457; match to protein family HMM PF04542; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.507
NMB2145
Hypothetical protein; Identified by Glimmer2; putative.
       0.503
NMB2142
Conserved hypothetical protein; Identified by similarity to EGAD:28591; match to protein family HMM PF05114; Belongs to the UPF0276 family.
       0.463
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
   
    0.438
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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