STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI72338.1Putative transmembrane permease MsmF; KEGG: rcu:RCOM_1803670 1.3e-34 L-arabinose transport system permease protein araP, putative; Psort location: CytoplasmicMembrane, score: 10.00. (304 aa)    
Predicted Functional Partners:
ERI72339.1
ABC transporter, permease protein; KEGG: ttr:Tter_2023 3.7e-51 sugar ABC transporter ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.966
ERI72330.1
ABC transporter, permease protein; KEGG: bsr:I33_2930 3.2e-22 L-arabinose transport system permease protein AraP K10189; Psort location: CytoplasmicMembrane, score: 10.00.
    
 
0.920
ERI72337.1
ABC transporter, solute-binding protein; KEGG: ebe:B21_03866 3.1e-09 malE; malE, subunit of maltose ABC transporter K10108.
 
  0.911
ERI65853.1
ABC transporter, permease protein; KEGG: snc:HMPREF0837_10108 9.3e-39 malD; maltodextrin ABC transporter permease K10110; Psort location: CytoplasmicMembrane, score: 10.00.
 0.901
ERI73020.1
ABC transporter, permease protein; KEGG: ttr:Tter_2023 1.7e-48 sugar ABC transporter ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.870
ERI73004.1
ABC transporter, permease protein; KEGG: bcv:Bcav_3574 3.5e-55 monosaccharide-transporting ATPase K10190; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.869
ERI72861.1
ABC transporter, permease protein; KEGG: tex:Teth514_2199 1.1e-49 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.869
ERI72362.1
ABC transporter, permease protein; KEGG: cyp:PCC8801_2231 1.4e-51 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.869
ERI71940.1
ABC transporter, permease protein; KEGG: bcv:Bcav_3574 1.5e-47 monosaccharide-transporting ATPase K10190; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.869
ERI71139.1
ABC transporter, permease protein; KEGG: tex:Teth514_2199 4.3e-50 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.869
Your Current Organism:
Clostridium sp. KLE1755
NCBI taxonomy Id: 1226325
Other names: C. sp. KLE 1755, Clostridium sp. KLE 1755
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