STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB87008.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (309 aa)    
Predicted Functional Partners:
SDC26378.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.729
SDB89244.1
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.718
SDB90434.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.706
SDB87022.1
Lipoprotein NlpD.
     
 0.698
SDC50580.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.657
surE
5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.652
SDB87808.1
LysR family transcriptional regulator, cys regulon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.605
SDB84981.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.507
Your Current Organism:
Acinetobacter kookii
NCBI taxonomy Id: 1226327
Other names: A. kookii, Acinetobacter kookii Choi et al. 2013, Acinetobacter sp. 11-0202, Acinetobacter sp. 11-0607, JCM 18512, KCTC 32033, strain 11-0202
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.