STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP70195.1O-antigen ligase. (493 aa)    
Predicted Functional Partners:
SFQ65542.1
O-antigen ligase.
  
  
  0.944
SFP70270.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
    0.901
SFP88012.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.863
SFP68270.1
Heptosyltransferase-2.
  
 
 0.842
SFQ69114.1
Heptosyltransferase-2.
  
 
 0.813
SFP70304.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.789
SFQ83020.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.788
SFQ83055.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.788
SFP70234.1
Hypothetical protein.
  
  
 0.783
SFP80422.1
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
    
 0.773
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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