STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP79979.1Methyl-accepting chemotaxis protein. (1486 aa)    
Predicted Functional Partners:
SFP68701.1
PAS domain S-box-containing protein.
 0.999
SFP70549.1
Hypothetical protein.
  
 0.999
SFP70584.1
PAS domain S-box-containing protein; Manually curated.
 
 0.999
SFP75151.1
PAS domain S-box-containing protein.
  
 0.999
SFP75803.1
Sensors of blue-light using FAD.
  
 0.999
SFP80013.1
Purine-binding chemotaxis protein CheW.
 
 0.999
SFP80073.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.999
SFP88995.1
Sensors of blue-light using FAD.
  
 0.999
SFP89464.1
PAS domain S-box-containing protein.
 0.999
SFP92712.1
PAS domain S-box-containing protein.
 
 0.999
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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