STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP80708.1Outer membrane protein beta-barrel domain-containing protein. (268 aa)    
Predicted Functional Partners:
SFQ33226.1
Gliding motility-associated protein GldL.
 
   
 0.805
SFQ25293.1
Cell surface protein SprA.
  
   
 0.804
SFQ33327.1
Hypothetical protein.
  
   
 0.802
menG
Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
       0.795
SFP80653.1
WD40-like Beta Propeller Repeat.
 
     0.792
SFQ31479.1
Outer membrane protein OmpA.
  
   
 0.785
SFQ57036.1
Hypothetical protein.
  
   
 0.777
SFP71948.1
Protein of unknown function.
  
     0.772
SFQ39421.1
Outer membrane protein beta-barrel domain-containing protein.
 
     0.764
SFQ33163.1
Type IX secretion system membrane protein, PorP/SprF family.
 
   
 0.762
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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