STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP91112.1Hypothetical protein. (137 aa)    
Predicted Functional Partners:
SFQ33141.1
uroporphyrinogen-III synthase.
  
     0.671
SFQ72726.1
Family of unknown function.
  
     0.635
SFP81233.1
Acyl-CoA reductase (LuxC).
  
  
  0.630
SFQ31497.1
Hypothetical protein.
  
     0.595
SFQ51256.1
Hypothetical protein.
  
     0.588
SFQ30108.1
Protein of unknown function.
  
     0.585
SFP91088.1
Lipopolysaccharide export system permease protein.
       0.569
SFQ21954.1
Hypothetical protein.
  
     0.569
SFQ28842.1
Hypothetical protein.
  
     0.568
SFP76575.1
Gliding motility-associated protein GldC.
  
     0.553
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.