STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP93445.1Hypothetical protein. (253 aa)    
Predicted Functional Partners:
SFP93418.1
Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
 
  
 0.924
SFP79979.1
Methyl-accepting chemotaxis protein.
    
  0.864
SFP92712.1
PAS domain S-box-containing protein.
    
  0.785
SFQ51523.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
  0.769
SFQ03897.1
Lipoprotein-releasing system permease protein.
  
     0.710
SFQ39455.1
Beta-barrel assembly machine subunit BamA.
  
     0.699
SFQ74340.1
Hypothetical protein.
  
     0.674
SFP91088.1
Lipopolysaccharide export system permease protein.
  
     0.659
SFQ47591.1
RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
     0.624
SFQ72726.1
Family of unknown function.
  
     0.603
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.