STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ05396.1Outer membrane protein OmpA. (233 aa)    
Predicted Functional Partners:
hppA
K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.
 
      0.899
SFP71676.1
OmpA family protein.
  
     0.771
SFQ31479.1
Outer membrane protein OmpA.
 
   0.727
SFQ49728.1
Thrombospondin type 3 repeat-containing protein.
  
     0.716
SFP89279.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
   
  0.585
SFQ76523.1
Outer membrane protein OmpA.
  
  
0.518
SFQ05426.1
Hypothetical protein.
       0.513
SFP86404.1
WD40-like Beta Propeller Repeat.
  
  
0.507
SFQ25390.1
Membrane-bound lytic murein transglycosylase D.
  
 
   0.496
SFQ00757.1
WD40-like Beta Propeller Repeat.
  
 
 
0.489
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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