STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ27883.1Membrane fusion protein, multidrug efflux system. (374 aa)    
Predicted Functional Partners:
SFQ27948.1
MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.
  0.942
SFP76301.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
  
 0.864
SFQ27845.1
Outer membrane protein TolC.
 
  0.855
SFQ58813.1
MacB-like core domain-containing protein.
  
 
 0.768
SFP88566.1
Outer membrane protein.
  
  0.722
SFQ57787.1
Outer membrane protein TolC.
 
  0.697
SFQ53395.1
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.692
SFQ68476.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
  0.673
SFQ49923.1
Outer membrane protein TolC.
  
  0.652
SFQ52420.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
  0.647
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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