STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ30564.1Hypothetical protein. (470 aa)    
Predicted Functional Partners:
SFQ30588.1
Long-chain fatty acid transport protein.
 
     0.912
SFQ72940.1
Hypothetical protein.
  
     0.584
SFQ39971.1
3-hydroxyacyl-CoA dehydrogenase.
     
 0.520
SFQ35295.1
Kynurenine formamidase.
  
     0.496
SFQ30613.1
Lipopolysaccharide export system ATP-binding protein.
       0.494
SFQ53513.1
Protein of unknown function.
  
     0.491
SFQ40811.1
Por secretion system C-terminal sorting domain-containing protein.
    
 0.471
SFQ64986.1
Pectate lyase.
    
 0.471
SFQ40880.1
DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family.
    
  0.467
SFQ49621.1
Polygalacturonase.
    
  0.467
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.