STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ35408.1Bacteriocin-protection, YdeI or OmpD-Associated. (169 aa)    
Predicted Functional Partners:
SFQ71750.1
Protein of unknown function.
  
     0.664
SFP79792.1
Hypothetical protein.
  
     0.524
SFQ59356.1
Calcineurin-like phosphoesterase.
  
     0.517
SFQ75972.1
Hypothetical protein.
  
     0.508
SFP78508.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.502
SFQ81285.1
Hypothetical protein.
  
     0.487
SFQ39374.1
Surface antigen.
  
     0.485
SFQ38202.1
Calcineurin-like phosphoesterase.
  
     0.471
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
  0.470
SFQ57624.1
Hypothetical protein.
  
     0.470
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.