STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ38413.1Glycosyltransferase involved in cell wall bisynthesis. (370 aa)    
Predicted Functional Partners:
SFQ60961.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
  0.900
SFQ83055.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.793
SFQ83020.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.788
SFQ27146.1
UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
    0.780
SFQ46883.1
Hypothetical protein.
  
     0.645
SFQ22440.1
Polysaccharide export outer membrane protein.
  
 
  0.642
SFQ27079.1
UDP-N-acetylglucosamine 4-epimerase.
  
 
  0.641
SFQ38433.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
    0.621
SFQ22477.1
Capsular exopolysaccharide family.
 
  
 0.592
SFQ61919.1
Asparagine synthase (glutamine-hydrolysing).
  
     0.573
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.