STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
SFQ39586.1Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (276 aa)    
Predicted Functional Partners:
SFQ39604.1
Biopolymer transport protein ExbD.
 
  0.971
SFQ39622.1
Biopolymer transport protein ExbD.
 
  0.951
SFQ39637.1
Outer membrane transport energization protein ExbB.
 
  0.923
SFQ21377.1
Biopolymer transport protein ExbD.
  
  0.834
SFQ73585.1
TonB-linked outer membrane protein, SusC/RagA family.
  
  0.831
SFP90593.1
Biopolymer transport protein ExbD.
  
  0.764
SFQ27481.1
TonB-dependent Receptor Plug Domain.
  
  0.738
SFQ31955.1
TonB-dependent Receptor Plug Domain.
  
  0.738
SFQ36517.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain.
 
     0.682
SFQ31479.1
Outer membrane protein OmpA.
 
 
   0.675
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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