STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ40228.1Outer membrane protein beta-barrel domain-containing protein. (225 aa)    
Predicted Functional Partners:
SFQ41452.1
Hypothetical protein.
  
     0.756
SFP76406.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
     0.739
SFQ53999.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.732
SFQ34475.1
Protein of unknown function.
  
     0.720
SFQ33269.1
Gliding motility associated protien GldN.
  
     0.703
SFP72519.1
Protein of unknown function.
  
     0.670
SFQ72726.1
Family of unknown function.
  
     0.666
SFQ69272.1
Hypothetical protein.
  
     0.641
SFQ38468.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.623
SFQ33246.1
Gliding motility-associated protein GldM.
  
     0.611
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.