Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP72719.1 | SFQ02559.1 | SAMN04515668_0144 | SAMN04515668_1198 | O-succinylbenzoate synthase. | Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.415 |
SFP72719.1 | SFQ60422.1 | SAMN04515668_0144 | SAMN04515668_3240 | O-succinylbenzoate synthase. | 2-dehydro-3-deoxygalactonokinase. | 0.499 |
SFP81360.1 | SFQ60422.1 | SAMN04515668_0438 | SAMN04515668_3240 | Hypothetical protein. | 2-dehydro-3-deoxygalactonokinase. | 0.489 |
SFQ02559.1 | SFP72719.1 | SAMN04515668_1198 | SAMN04515668_0144 | Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | O-succinylbenzoate synthase. | 0.415 |
SFQ02559.1 | SFQ22863.1 | SAMN04515668_1198 | SAMN04515668_1476 | Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | L-alanine-DL-glutamate epimerase. | 0.431 |
SFQ02559.1 | SFQ60422.1 | SAMN04515668_1198 | SAMN04515668_3240 | Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 2-dehydro-3-deoxygalactonokinase. | 0.499 |
SFQ22863.1 | SFQ02559.1 | SAMN04515668_1476 | SAMN04515668_1198 | L-alanine-DL-glutamate epimerase. | Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.431 |
SFQ22863.1 | SFQ60422.1 | SAMN04515668_1476 | SAMN04515668_3240 | L-alanine-DL-glutamate epimerase. | 2-dehydro-3-deoxygalactonokinase. | 0.579 |
SFQ41160.1 | SFQ41233.1 | SAMN04515668_2325 | SAMN04515668_2328 | Altronate hydrolase. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.444 |
SFQ41160.1 | SFQ60405.1 | SAMN04515668_2325 | SAMN04515668_3239 | Altronate hydrolase. | Galactonate dehydratase. | 0.478 |
SFQ41160.1 | SFQ60422.1 | SAMN04515668_2325 | SAMN04515668_3240 | Altronate hydrolase. | 2-dehydro-3-deoxygalactonokinase. | 0.659 |
SFQ41233.1 | SFQ41160.1 | SAMN04515668_2328 | SAMN04515668_2325 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Altronate hydrolase. | 0.444 |
SFQ41233.1 | SFQ60422.1 | SAMN04515668_2328 | SAMN04515668_3240 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 2-dehydro-3-deoxygalactonokinase. | 0.621 |
SFQ41233.1 | ilvD | SAMN04515668_2328 | SAMN04515668_4072 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.655 |
SFQ60392.1 | SFQ60405.1 | SAMN04515668_3238 | SAMN04515668_3239 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Galactonate dehydratase. | 0.767 |
SFQ60392.1 | SFQ60422.1 | SAMN04515668_3238 | SAMN04515668_3240 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 2-dehydro-3-deoxygalactonokinase. | 0.759 |
SFQ60392.1 | ilvD | SAMN04515668_3238 | SAMN04515668_4072 | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.655 |
SFQ60405.1 | SFQ41160.1 | SAMN04515668_3239 | SAMN04515668_2325 | Galactonate dehydratase. | Altronate hydrolase. | 0.478 |
SFQ60405.1 | SFQ60392.1 | SAMN04515668_3239 | SAMN04515668_3238 | Galactonate dehydratase. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.767 |
SFQ60405.1 | SFQ60422.1 | SAMN04515668_3239 | SAMN04515668_3240 | Galactonate dehydratase. | 2-dehydro-3-deoxygalactonokinase. | 0.925 |
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