STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ65996.1Alpha-amylase. (793 aa)    
Predicted Functional Partners:
SFQ34889.1
Starch phosphorylase.
 
 0.899
SFQ71878.1
1,4-alpha-glucan branching enzyme.
 
 
 0.888
SFQ76242.1
4-alpha-glucanotransferase.
 
 
 0.884
SFP69389.1
Maltooligosyl trehalose hydrolase.
  
 
 0.872
SFQ04593.1
Pullulanase; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.831
SFP85534.1
Glycosidase.
  
  
  0.819
SFP84605.1
Trehalose 6-phosphate synthase/phosphatase.
  
 
 0.781
SFQ52278.1
Trehalose 6-phosphate synthase/phosphatase.
  
 
 0.781
SFP79979.1
Methyl-accepting chemotaxis protein.
  
  
 0.735
SFQ41655.1
Lipid A 3-O-deacylase (PagL).
  
  
 0.707
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.