STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ67231.1Choline dehydrogenase. (668 aa)    
Predicted Functional Partners:
SFQ74180.1
WD domain-containing protein, G-beta repeat-containing protein.
    
  0.854
SFQ71622.1
Hypothetical protein.
  
  
  0.651
tal-2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
  0.631
SFP87609.1
Ankyrin repeat-containing protein.
    
 0.585
SFQ72300.1
Hypothetical protein.
    
 0.585
SFQ73774.1
Hypothetical protein.
    
 0.585
SFQ68075.1
Hypothetical protein.
  
  
 0.552
SFQ76999.1
Molybdate transporter of MFS superfamily protein.
  
     0.511
SFQ67218.1
Hypothetical protein.
       0.509
SFP75428.1
Cytochrome C oxidase, cbb3-type, subunit III.
    
  0.486
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.