STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ68487.1Hypothetical protein; Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family. (498 aa)    
Predicted Functional Partners:
SFQ33141.1
uroporphyrinogen-III synthase.
  
 
 0.806
SFQ18914.1
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
 
 
 0.805
SFP71205.1
Methyltransferase, FkbM family.
    
 0.726
SFQ75886.1
Porphobilinogen synthase; Belongs to the ALAD family.
 
  
 0.668
SFQ52553.1
Phosphoadenosine phosphosulfate reductase family protein.
  
  
 0.663
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.644
SFP69352.1
Nitroreductase.
    
 0.640
SFQ39656.1
XTP/dITP diphosphohydrolase.
    
  0.634
SFQ57115.1
(2Fe-2S) ferredoxin.
    
  0.613
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
    
 0.580
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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