STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ69011.1Glycine-zipper containing OmpA-like membrane domain-containing protein. (96 aa)    
Predicted Functional Partners:
SFP89279.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
   
  0.585
SFP92104.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.464
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.458
SFQ69000.1
Outer membrane protein OmpA.
       0.443
SFQ69023.1
Outer membrane protein OmpA.
       0.421
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.