STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ73107.1Putative membrane protein. (189 aa)    
Predicted Functional Partners:
SFQ73118.1
Protein SCO1/2.
 
    0.930
SFQ73126.1
Cytochrome c oxidase subunit IV.
 
     0.854
SFQ73136.1
Cytochrome c oxidase subunit 3.
 
     0.795
SFQ73093.1
Hypothetical protein.
 
     0.737
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
    0.722
SFQ73080.1
Uncharacterized conserved protein, DUF983 family; Manually curated.
 
     0.703
SFQ73190.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
    0.700
SFP75463.1
Protein SCO1/2.
 
    0.694
SFQ73180.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
     0.652
SFQ73148.1
Cytochrome c oxidase subunit 3.
 
     0.606
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.