STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ75962.1Tfp pilus assembly protein PilF. (255 aa)    
Predicted Functional Partners:
SFQ69272.1
Hypothetical protein.
  
     0.706
SFQ25951.1
Hypothetical protein.
  
     0.699
SFQ53489.1
Hypothetical protein.
  
     0.693
SFQ73509.1
Hypothetical protein.
  
     0.687
SFQ77567.1
Cyclic nucleotide-binding domain-containing protein.
  
     0.633
SFP75781.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.626
SFP78770.1
Tetratricopeptide repeat-containing protein.
  
     0.599
SFQ50673.1
Hypothetical protein.
  
     0.594
SFQ34424.1
Hypothetical protein.
  
     0.588
SFP79979.1
Methyl-accepting chemotaxis protein.
    
 0.549
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.