STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ77496.1Glycosyl hydrolases family 16. (291 aa)    
Predicted Functional Partners:
SFQ77505.1
Beta-glucanase, GH16 family.
 
    
0.773
SFQ77485.1
Hypothetical protein.
       0.463
SFP97441.1
Predicted hydrolase of the alpha/beta superfamily.
  
     0.440
SFQ05258.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
 
     0.411
SFQ05288.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
 
     0.407
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.