STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH19877.1KEGG: pfl:PFL_0270 2.3e-28 tauC; taurine ABC transporter permease K15552; Psort location: CytoplasmicMembrane, score: 10.00. (284 aa)    
Predicted Functional Partners:
ERH19878.1
NMT1/THI5-like protein; KEGG: apb:SAR116_1971 1.9e-12 ABC transporter substrate-binding protein K15598.
 
 
 0.995
ERH19149.1
ABC transporter, ATP-binding protein; KEGG: ccs:CCNA_02717 9.2e-32 malK; maltose/maltodextrin transport ATP-binding protein MalK K02049; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.965
ERH17519.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: iva:Isova_0767 5.7e-39 ferredoxin--NAD(+) reductase; Psort location: Cytoplasmic, score: 9.64.
    
  0.837
hisE
KEGG: jde:Jden_1310 2.9e-28 phosphoribosyl-ATP diphosphatase; K01523 phosphoribosyl-ATP pyrophosphohydrolase; Psort location: Cytoplasmic, score: 7.50.
       0.499
ERH19150.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.497
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
       0.481
ERH19876.1
KEGG: bcv:Bcav_2050 4.1e-84 ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 7.50.
       0.461
ERH16965.1
ABC transporter, ATP-binding protein; KEGG: bfa:Bfae_30040 1.4e-90 ABC-type proline/glycine betaine transporter ATPase K05847; Psort location: CytoplasmicMembrane, score: 9.96.
     0.441
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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