STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH19819.1Transporter, major facilitator family protein; KEGG: mdo:100019640 4.1e-18 uncharacterized LOC100019640; K00623 choline O-acetyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (386 aa)    
Predicted Functional Partners:
ERH19820.1
Transcriptional regulator, TetR family.
 
     0.756
ERH19846.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 7.50.
  
     0.475
ERH19887.1
Hypothetical protein; KEGG: epr:EPYR_00426 4.1e-10 helicase senataxin; Psort location: Cytoplasmic, score: 7.50.
  
    0.471
ERH17514.1
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
     0.470
ERH18952.1
Efflux ABC transporter, permease protein; KEGG: ase:ACPL_6767 4.3e-09 Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.455
ERH19735.1
Transcriptional regulator, TetR family.
  
     0.443
ERH14127.1
Hypothetical protein; KEGG: epr:EPYR_00426 4.5e-24 helicase senataxin.
  
    0.413
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.