STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH19613.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (307 aa)    
Predicted Functional Partners:
ERH19491.1
Methyl-accepting chemotaxis family protein; KEGG: eab:ECABU_c34920 4.9e-15 aer; aerotaxis sensor receptor K03776; Psort location: CytoplasmicMembrane, score: 8.78.
    
0.795
ERH19728.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.758
ERH16827.1
Hypothetical protein; KEGG: rsc:RCFBP_20327 0.0016 bacteriophage lysis protein; K14744 putative Rz endopeptidase from lambdoid prophage DLP12.
  
     0.754
ERH18990.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.739
ERH19677.1
KEGG: tte:TTE0061 3.3e-50 hypothetical protein; K01190 beta-galactosidase; Psort location: Cytoplasmic, score: 7.50.
  
     0.727
ERH19100.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: isc:IscW_ISCW000348 0.00099 secreted mucin MUC17, putative; Psort location: Extracellular, score: 8.91.
  
     0.725
ERH14938.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: pms:KNP414_07941 1.8e-25 Sensory box histidine kinase YycG; K07652 two-component system, OmpR family, sensor histidine kinase VicK; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.724
ERH17356.1
KEGG: bln:Blon_0478 1.0e-64 asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
     0.717
ERH19417.1
Hypothetical protein.
  
    0.715
ERH18952.1
Efflux ABC transporter, permease protein; KEGG: ase:ACPL_6767 4.3e-09 Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.714
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.