STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH19467.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. (83 aa)    
Predicted Functional Partners:
ERH19437.1
Vitamin K epoxide reductase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
      
0.697
ERH19438.1
HAD hydrolase, family IIB; KEGG: pfr:PFREUD_07400 4.1e-68 pmm; phosphomannomutase K07024; Psort location: Cytoplasmic, score: 7.50.
       0.582
ERH19439.1
Hypothetical protein; KEGG: pru:PRU_0055 2.4e-11 rluB; ribosomal large subunit pseudouridine synthase B; K06178 23S rRNA pseudouridine2605 synthase.
       0.562
ERH19599.1
Redoxin family protein; KEGG: pfc:PflA506_2664 9.4e-62 cytochrome C biogenesis domain protein/antioxidant, AhpC/TSA family; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.441
ERH19441.1
Putative iron-dependent repressor IdeR; KEGG: mrd:Mrad2831_3755 0.0063 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
       0.405
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.