STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH19345.1Efflux ABC transporter, permease protein; KEGG: ase:ACPL_6767 0.00045 Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00. (458 aa)    
Predicted Functional Partners:
ERH19344.1
KEGG: bbp:BBPR_0246 1.4e-60 ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
  0.885
ERH19342.1
Response regulator receiver domain protein; KEGG: ase:ACPL_6608 8.5e-45 Sensor protein vraS; Psort location: Cytoplasmic, score: 9.67.
 
     0.678
ERH19343.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ase:ACPL_2199 1.6e-36 histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
 
    0.663
ERH17527.1
Hypothetical protein; KEGG: gvg:HMPREF0421_20853 9.5e-08 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.434
ERH19240.1
Phosphotransferase enzyme family protein; KEGG: sna:Snas_4099 0.0056 3''-kinase; Psort location: Cytoplasmic, score: 7.50.
  
     0.433
ERH19884.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.422
ERH19099.1
Hypothetical protein; KEGG: pfr:PFREUD_08010 8.0e-120 galT; galactose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.421
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.