STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH19147.1Cupin domain protein. (124 aa)    
Predicted Functional Partners:
ERH19148.1
Methyltransferase domain protein; KEGG: mul:MUL_3266 4.2e-66 methyltransferase; K00599; Psort location: Cytoplasmic, score: 7.50.
 
     0.905
ERH19149.1
ABC transporter, ATP-binding protein; KEGG: ccs:CCNA_02717 9.2e-32 malK; maltose/maltodextrin transport ATP-binding protein MalK K02049; Psort location: CytoplasmicMembrane, score: 9.96.
       0.778
ERH17661.1
ThiS family protein; KEGG: afw:Anae109_1160 0.00028 molybdopterin converting factor subunit 1; K03635 molybdopterin synthase catalytic subunit; Psort location: CytoplasmicMembrane, score: 8.16.
 
    0.455
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
   0.426
ERH19099.1
Hypothetical protein; KEGG: pfr:PFREUD_08010 8.0e-120 galT; galactose-1-phosphate uridylyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
     0.413
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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