STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH19148.1Methyltransferase domain protein; KEGG: mul:MUL_3266 4.2e-66 methyltransferase; K00599; Psort location: Cytoplasmic, score: 7.50. (309 aa)    
Predicted Functional Partners:
ERH19147.1
Cupin domain protein.
 
     0.905
ERH14727.1
MaoC-like protein; KEGG: cva:CVAR_2516 0. fas; fatty acid synthase K11533; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.828
ERH14207.1
Beta-ketoacyl synthase protein; KEGG: cva:CVAR_2516 0. fas; fatty acid synthase K11533; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.824
ERH19149.1
ABC transporter, ATP-binding protein; KEGG: ccs:CCNA_02717 9.2e-32 malK; maltose/maltodextrin transport ATP-binding protein MalK K02049; Psort location: CytoplasmicMembrane, score: 9.96.
       0.798
ERH18959.1
Hypothetical protein; KEGG: rop:ROP_52540 3.0e-17 methyltransferase.
   
 0.418
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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