STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH19112.1Hypothetical protein; KEGG: fre:Franean1_4158 0.0021 magnesium chelatase K03404; Psort location: CytoplasmicMembrane, score: 10.00. (954 aa)    
Predicted Functional Partners:
ERH16934.1
Hypothetical protein.
 
     0.794
ERH14391.1
Thiaminepyrophosphokinase, catalytic domain protein; KEGG: sit:TM1040_1966 0.00010 thiamine pyrophosphokinase; K00949 thiamine pyrophosphokinase; Psort location: Cytoplasmic, score: 7.50.
 
     0.780
ERH19882.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.770
ERH14255.1
Glycosyltransferase, group 2 family protein; KEGG: hla:Hlac_0696 4.9e-15 glycosyl transferase family 2; K00721 dolichol-phosphate mannosyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
     0.744
ERH14392.1
Hypothetical protein; KEGG: ctu:CTU_13460 5.3e-05 tolA; cell envelope integrity inner membrane protein TolA K03646.
 
     0.737
ERH19577.1
Hypothetical protein; KEGG: ipa:Isop_2159 2.1e-27 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial.
  
   0.729
ERH16935.1
Putative integral membrane protein MviN; KEGG: pfe:PSF113_5043 1.1e-20 murJ; protein MurJ K03980; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.706
ERH19540.1
Putative acetoacetyl-CoA reductase; KEGG: pcn:TIB1ST10_09305 1.0e-94 3-ketoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase; Psort location: Cytoplasmic, score: 9.97.
  
   0.617
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.599
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.597
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.