STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH18791.1Glycerophosphodiester phosphodiesterase family protein; KEGG: ahe:Arch_0350 7.8e-58 glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase; Psort location: Cytoplasmic, score: 7.50. (261 aa)    
Predicted Functional Partners:
ERH18792.1
Peptidase, M23 family; KEGG: aai:AARI_03820 3.2e-27 peptidase M23; Psort location: Extracellular, score: 9.72.
       0.796
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.672
ERH18653.1
KEGG: pad:TIIST44_04055 5.2e-180 glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
 0.664
ERH17801.1
Transporter, major facilitator family protein; KEGG: bml:BMA10229_1937 0.0032 diaminobutyrate--pyruvate aminotransferase/membrane protein; K00836 diaminobutyrate-2-oxoglutarate transaminase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.533
ERH18651.1
KEGG: ahe:Arch_0265 6.4e-166 glycerol-3-phosphate dehydrogenase; K00113 glycerol-3-phosphate dehydrogenase subunit C; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
  0.525
ERH16577.1
KEGG: bbb:BIF_00750 9.4e-62 Nucleotide pyrophosphatase; Psort location: CytoplasmicMembrane, score: 8.16.
  
 
 0.524
ERH16744.1
Cyclic nucleotide-binding domain protein; KEGG: bde:BDP_1802 1.2e-47 Crp family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.505
ERH15136.1
Haloacid dehalogenase-like hydrolase; KEGG: ali:AZOLI_2455 8.8e-11 haloacid dehalogenase; K01560 2-haloacid dehalogenase; Psort location: Cytoplasmic, score: 7.50.
    
  0.483
ERH16886.1
Hypothetical protein; KEGG: ahe:Arch_1430 4.1e-84 adenylate/guanylate cyclase K01768; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.479
rsgA
Hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
    
  0.476
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.