STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH18811.1DoxX family protein. (160 aa)    
Predicted Functional Partners:
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.841
rsgA
Hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.841
ERH18814.1
KEGG: bcv:Bcav_1261 1.0e-87 histidinol-phosphate phosphatase; K05602 histidinol-phosphatase; Psort location: Cytoplasmic, score: 7.50.
       0.838
ERH18815.1
KEGG: cuc:CULC809_01915 6.0e-44 gpt; purine phosphoribosyltransferase K07101; Psort location: Cytoplasmic, score: 7.50.
       0.618
ERH18805.1
Mycothiol system anti-sigma-R factor; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.597
ERH18810.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.547
ERH18958.1
5'-nucleotidase protein; KEGG: cgt:cgR_0412 2.4e-95 hypothetical protein; K01081 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
  
  
  0.498
ERH14569.1
TOBE domain protein; KEGG: mcu:HMPREF0573_10524 1.2e-13 ABC transporter ATP-binding protein K10243.
 
    0.457
sbcD
Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
       0.447
ERH18818.1
KEGG: azo:azo0200 7.1e-96 sbcC; exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 9.95.
       0.445
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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