STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH18701.1Transporter, major facilitator family protein; KEGG: hse:Hsero_0990 3.1e-38 mmr; methylenomycin A resistance protein; Psort location: CytoplasmicMembrane, score: 10.00. (556 aa)    
Predicted Functional Partners:
ERH18964.1
Transporter, major facilitator family protein; KEGG: apb:SAR116_2000 1.2e-10 Bcr/CflA subfamily drug resistance transporter K07552; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.705
ERH18702.1
Transcriptional regulator, TetR family; KEGG: cnc:CNE_2c15950 0.00070 codA; cytosine deaminase; Psort location: Cytoplasmic, score: 7.50.
 
     0.592
ERH19842.1
Transporter, major facilitator family protein; KEGG: ase:ACPL_7379 2.6e-20 EmrB/QacA subfamily drug resistance transporter; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.574
ERH19418.1
Transporter, major facilitator family protein; KEGG: pfe:PSF113_1775 3.9e-12 nasA; protein NasA K02575; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.523
ERH20100.1
KEGG: apb:SAR116_2000 4.5e-24 Bcr/CflA subfamily drug resistance transporter K07552; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.507
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.