STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ERH17690.1Putative crotonobetainyl-CoA:carnitine CoA-transferase; KEGG: ahe:Arch_1362 7.3e-165 L-carnitine dehydratase/bile acid-inducible protein F; K08298 crotonobetainyl-CoA:carnitine CoA-transferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the CoA-transferase III family. (402 aa)    
Predicted Functional Partners:
ERH17689.1
KEGG: pfr:PFREUD_02420 4.9e-168 caiA; crotonobetainyl-CoA dehydrogenase K08297; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.908
ERH17687.1
Transporter, major facilitator family protein; KEGG: psu:Psesu_2370 0.00036 NAD(P)(+) transhydrogenase K00325; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.882
sucD
succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
   
  0.854
sucC
succinate-CoA ligase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
   
  0.849
ERH17688.1
Putative carboxylesterase; KEGG: ahe:Arch_1364 5.4e-82 alpha/beta hydrolase; K01066 esterase / lipase; Psort location: Cytoplasmic, score: 9.97.
 
    0.847
ERH17554.1
MaoC-like protein; KEGG: ahe:Arch_1360 9.6e-140 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.792
ERH17553.1
KEGG: pfr:PFREUD_02440 1.5e-134 caiC; crotonobetaine/carnitine-CoA ligase K02182; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.703
ERH17654.1
KEGG: clj:CLJU_c39440 3.6e-140 acyl-CoA dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.663
ERH17558.1
KEGG: apb:SAR116_1870 3.5e-10 electron transfer flavoprotein subunit beta K03521.
 
 
   0.621
ERH14727.1
MaoC-like protein; KEGG: cva:CVAR_2516 0. fas; fatty acid synthase K11533; Psort location: Cytoplasmic, score: 7.50.
  
 0.579
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.