STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH17240.1ABC transporter, ATP-binding protein; KEGG: del:DelCs14_4132 4.5e-126 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00. (555 aa)    
Predicted Functional Partners:
ERH17239.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A2339 1.3e-119 ABC transporter K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.826
ERH14727.1
MaoC-like protein; KEGG: cva:CVAR_2516 0. fas; fatty acid synthase K11533; Psort location: Cytoplasmic, score: 7.50.
   
 0.793
ERH14207.1
Beta-ketoacyl synthase protein; KEGG: cva:CVAR_2516 0. fas; fatty acid synthase K11533; Psort location: CytoplasmicMembrane, score: 8.78.
   
 0.793
ERH19818.1
ABC transporter, ATP-binding protein; KEGG: gni:GNIT_2052 1.8e-32 msbA; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.693
ERH19565.1
Cobalt transport protein; KEGG: bya:BANAU_0146 9.4e-06 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.509
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
   0.440
ERH19564.1
Hypothetical protein; KEGG: hme:HFX_0985 0.00053 nuoM; NADH dehydrogenase, subunit M (ubiquinone) K00342; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.437
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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