STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH16889.1GtrA-like protein; KEGG: cyu:UCYN_12200 5.4e-07 hypothetical protein; K00721 dolichol-phosphate mannosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (156 aa)    
Predicted Functional Partners:
ERH18988.1
KEGG: aai:AARI_07810 4.0e-96 dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.633
purK
Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
       0.578
ERH16579.1
Hypothetical protein; KEGG: nda:Ndas_3381 4.3e-08 Rne/Rng family ribonuclease; K08300 ribonuclease E; Psort location: Cytoplasmic, score: 7.50.
  
     0.525
ERH18657.1
Hypothetical protein.
  
     0.515
ERH16410.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.499
purE
Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.479
ERH16672.1
Hypothetical protein; KEGG: aba:Acid345_3863 0.0060 pseudouridine synthase, Rsu; K06178 23S rRNA pseudouridine2605 synthase; Psort location: CytoplasmicMembrane, score: 8.16.
  
     0.471
ERH18661.1
DNA binding domain, excisionase family; KEGG: scd:Spica_1045 0.0068 putative PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component; Psort location: Cytoplasmic, score: 7.50.
  
    0.420
ERH14350.1
FemAB family protein; KEGG: mcl:MCCL_1041 7.0e-34 femA; methicillin resistance protein FemA; K11694 peptidoglycan pentaglycine glycine transferase (the second and third glycine); Psort location: Cytoplasmic, score: 9.97.
  
     0.418
ERH19356.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.412
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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