STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH16728.1Hypothetical protein; KEGG: tbi:Tbis_2100 0.0026 histidine ammonia-lyase K01745; Psort location: CytoplasmicMembrane, score: 8.16. (869 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.982
ERH16727.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
   
 0.975
ERH16730.1
Hypothetical protein; KEGG: nda:Ndas_2268 0.0029 rRNA guanine-N1-methyltransferase; K00563 23S rRNA (guanine745-N1)-methyltransferase.
 
     0.961
ERH16731.1
SWIM zinc finger domain protein; KEGG: sro:Sros_5456 0.0044 acetyl-CoA C-acyltransferase K00626; Psort location: Cytoplasmic, score: 7.50.
 
     0.961
ERH16729.1
ATPase family protein; KEGG: kcr:Kcr_1472 1.4e-18 ATPase; K03924 MoxR-like ATPase; Psort location: CytoplasmicMembrane, score: 8.16.
 
  
 0.954
ERH16636.1
KEGG: hiq:CGSHiGG_02350 2.2e-21 iron-sulfur cluster insertion protein ErpA K15724; Psort location: Cytoplasmic, score: 7.50; Belongs to the HesB/IscA family.
    
 
 0.738
ERH16732.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.497
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
 
 0.492
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
     
 0.456
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
  0.441
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.