STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH16734.1ABC-2 type transporter; KEGG: aai:AARI_02020 0.00040 ABC transporter ATPase and permease components K01990; Psort location: CytoplasmicMembrane, score: 10.00. (233 aa)    
Predicted Functional Partners:
ERH16735.1
KEGG: rdn:HMPREF0733_11092 3.4e-57 ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
  0.907
ERH19629.1
Putative daunorubicin/doxorubicin resistance ATP-binding protein DrrA; KEGG: rdn:HMPREF0733_11092 8.8e-50 ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
  0.770
ERH16736.1
Transcriptional regulator, TetR family; KEGG: cnc:CNE_2c15950 0.00021 codA; cytosine deaminase.
 
    0.650
ERH19887.1
Hypothetical protein; KEGG: epr:EPYR_00426 4.1e-10 helicase senataxin; Psort location: Cytoplasmic, score: 7.50.
  
     0.516
ERH18952.1
Efflux ABC transporter, permease protein; KEGG: ase:ACPL_6767 4.3e-09 Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.449
ERH16737.1
Hypothetical protein.
  
    0.437
ERH19848.1
Hypothetical protein; KEGG: cnc:CNE_2c24360 0.0017 alpha-beta hydrolase superfamily esterase K07002; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.435
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.