STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH16685.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87. (108 aa)    
Predicted Functional Partners:
ERH19953.1
Hypothetical protein; KEGG: pjd:Pjdr2_5076 2.0e-06 alpha-L-fucosidase; Psort location: Extracellular, score: 9.13.
    
   0.578
ERH19940.1
Hypothetical protein; KEGG: pjd:Pjdr2_5076 1.5e-06 alpha-L-fucosidase.
    
   0.578
ERH19704.1
Type VII secretion protein EccB; KEGG: bde:BDP_1577 2.0e-41 serine protease; Psort location: CytoplasmicMembrane, score: 9.55.
    
   0.578
ERH18554.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: bbp:BBPR_0193 2.4e-06 1,2-A-L-fucosidase; Psort location: Cellwall, score: 10.00.
    
   0.578
ERH17338.1
KEGG: bbp:BBPR_0426 2.3e-184 fibronectin type III.
    
   0.578
ERH16979.1
KEGG: rcu:RCOM_1052700 2.3e-17 ATP binding protein, putative; Psort location: Cellwall, score: 10.00.
    
   0.578
ERH16765.1
Hypothetical protein.
    
   0.578
ERH14195.1
Hypothetical protein; KEGG: dme:Dmel_CG33103 0.0058 Ppn; Papilin.
    
   0.578
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.