STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH16598.1Hypothetical protein; KEGG: azo:azo0200 2.0e-06 sbcC; exonuclease SbcC K03546; Psort location: CytoplasmicMembrane, score: 10.00. (666 aa)    
Predicted Functional Partners:
ERH16597.1
PspA/IM30 family protein; KEGG: phu:Phum_PHUM098460 4.1e-05 myosin-9, putative K10352; Psort location: CytoplasmicMembrane, score: 8.78.
 
     0.910
ERH19230.1
Phosphoribosyl transferase domain protein; KEGG: cfl:Cfla_0563 0.00026 HhH-GPD family protein; K03575 A/G-specific adenine glycosylase; Psort location: Cytoplasmic, score: 7.50.
 
     0.612
ERH19250.1
Hypothetical protein; KEGG: ase:ACPL_6596 1.7e-12 putative E3 ubiquitin-protein ligase HERC4.
   
  0.590
ERH18898.1
Hypothetical protein.
   
  0.590
ERH19410.1
Hypothetical protein.
 
    0.581
ERH19813.1
Hypothetical protein; KEGG: rpm:RSPPHO_00344 0.0017 MerR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
     0.551
ERH16599.1
Cold-shock DNA-binding domain protein; KEGG: hip:CGSHiEE_04760 0.00053 aspartate-semialdehyde dehydrogenase K03704; Psort location: Cytoplasmic, score: 7.50.
       0.551
ERH16600.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.551
ERH16601.1
KEGG: ahe:Arch_1620 5.9e-108 mannose-6-phosphate isomerase K01809; Psort location: Cytoplasmic, score: 7.50.
       0.507
ERH16619.1
DsbA-like protein; KEGG: bbf:BBB_1825 4.8e-07 DSBA oxidoreductase.
  
    0.501
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.