STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH16568.1FemAB family protein; KEGG: eat:EAT1b_2964 2.6e-08 Methicillin resistance protein; K11693 peptidoglycan pentaglycine glycine transferase (the first glycine); Psort location: Cytoplasmic, score: 7.50. (340 aa)    
Predicted Functional Partners:
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
   
 
 0.784
ERH14351.1
Hypothetical protein; KEGG: efc:EFAU004_01690 3.3e-27 carbamoyl phosphate synthase-like protein; Psort location: Cytoplasmic, score: 7.50.
      0.680
ERH19703.1
Type VII secretion integral membrane protein EccD; KEGG: sbh:SBI_05829 0.0041 hypothetical protein; K01673 carbonic anhydrase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.643
ERH16566.1
KEGG: ahe:Arch_0798 5.0e-127 3'-5' exonuclease; K03684 ribonuclease D; Psort location: Cytoplasmic, score: 9.97.
       0.584
ERH16567.1
Hypothetical protein.
       0.571
ERH19704.1
Type VII secretion protein EccB; KEGG: bde:BDP_1577 2.0e-41 serine protease; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.568
ERH19086.1
Hypothetical protein; KEGG: ace:Acel_1458 4.3e-18 glycosyl hydrolase family chitinase K01183.
  
     0.427
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.