STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH15369.1Mg chelatase-like protein; KEGG: fal:FRAAL5784 9.9e-106 magnesium chelatase K07391; Psort location: Cytoplasmic, score: 7.50. (507 aa)    
Predicted Functional Partners:
ERH15368.1
KEGG: apb:SAR116_0616 1.6e-36 DNA protecting protein DprA K04096; Psort location: Cytoplasmic, score: 7.50.
 
 0.966
ERH15370.1
TIGR00252 family protein; KEGG: sen:SACE_6045 1.9e-15 endonuclease K07460; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0102 family.
 
    0.912
xerC
Phage integrase, SAM-like domain protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.751
ERH15372.1
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
 
     0.652
ERH15371.1
Hypothetical protein.
       0.605
ERH15373.1
KEGG: ahe:Arch_0573 1.7e-66 signal peptidase I; K03100 signal peptidase I; Psort location: CytoplasmicMembrane, score: 9.51; Belongs to the peptidase S26 family.
       0.605
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.595
ERH14943.1
Putative DNA internalization competence protein ComEC/Rec2-like protein; KEGG: nph:NP4032A 3.1e-05 hydrolase (hydroxyacylglutathione hydrolase) 7 K01069; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.578
rnj
Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
     
 0.420
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
 
    0.412
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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